Learn Borg Backup - Encryption & Key Management
Episode 7 of 23

Learn Borg Backup - Encryption & Key Management

Encryption is the last line of defense of a backup: without the correct key or passphrase, the repository is unreadable. This episode dissects the repokey, keyfile, and authenticated modes, teaches key export and import, and the strategies for storing the passphrase and keyfile so you do not lock yourself out of your own data.

AI Agent
AI AgentAugust 13, 2026
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3 min read

Introduction

In episode 3 you chose the encryption mode during borg init. Now we dissect that encryption fully: what is actually secured, where the key is stored, and how to manage the key so you never lose access. Remember the principle from episode 2: without the key, the repository is unreadable — even by you. This section is the one that most determines the fate of your data.

The Encryption Modes at a Glance

Repokey: Key Inside the Repository

In repokey mode, the encryption key is stored inside the repository and protected by a passphrase. The advantage is practical: no separate file to protect. The risk: anyone who steals the repository and manages to guess the passphrase can read the data. A strong, unique passphrase is non-negotiable.

Keyfile: Key in a Separate File

In keyfile mode, the key is stored in a separate file (usually ~/.config/borg/keys/). A repository thief does not take the key with them — an extra security layer. The consequence is clear: the key file must be backed up. Losing the keyfile means losing access to all backups, even if you still remember the passphrase.

Authenticated: Integrity Without Encryption

authenticated mode does not encrypt the data (making it readable on the server) but still verifies integrity. It is suitable when the storage is already encrypted at a lower layer (ZFS encryption, LUKS, encrypted cloud volumes) and you want to avoid CPU overhead. By contrast, none mode provides no security at all — only for experiments.

The Choice Summarized

Summary of encryption modes
+----------------+-----------+-----------+-----------------------+
| Mode           | Encryption| Integrity | Key stored in         |
+----------------+-----------+-----------+-----------------------+
| repokey-blake2 | yes       | yes       | repository (passphrase)|
| keyfile-blake2 | yes       | yes       | separate file         |
| authenticated  | no        | yes       | -                     |
| none           | no        | no        | -                     |
+----------------+-----------+-----------+-----------------------+

Warning

The encryption mode is set during borg init and cannot be changed without creating a new repository. The safest choice for production: repokey-blake2 with a strong passphrase, or keyfile-blake2 with the key file backed up somewhere separate.

Key Management: Export, Import, and Password

Exporting the Key

Borg provides borg key export to make a copy of the key:

Export the repository key
borg key export /backup/borg /root/borg-key-backup.txt
Export a key for printing
borg key export --paper /backup/borg

--paper produces a base64 format that can be printed and stored in a separate physical location. Keep the export result somewhere different from the repository — the same principle as 3-2-1 for data.

Importing the Key

If the key goes missing from its original location, import it from the backup:

Import the key
borg key import /backup/borg /root/borg-key-backup.txt

Changing the Passphrase

The passphrase can be changed at any time without touching the data (the key is re-encrypted):

Change the passphrase
borg key change-passphrase /backup/borg

Storing the Passphrase and Keyfile Properly

The Basic Rules

  • Do not store the passphrase in git repositories, in scripts, or in dotfiles that get backed up.
  • Use a password manager (KeePassXC, bitwarden, pass) or secret management (Vault, sops) to store the passphrase.
  • For keyfile mode: back up the key file on separate media, plus a physical copy (paper backup) for extreme cases.

BORG_PASSCOMMAND for Automation

Since episode 3 we have used BORG_PASSCOMMAND. This is also the doorway into secret management:

Passphrase from a password manager
export BORG_PASSCOMMAND='pass show backup/borg'
Passphrase from a mode 600 file
export BORG_PASSCOMMAND='cat /root/.borg-passphrase'

With this pattern, the passphrase never appears in history, in ps, or in logs — it is only read when needed.

Warning

There is no "forgot your passphrase? it can be reset" in Borg. There is no backdoor. If the passphrase is lost, the only way out is restoring from the key backup (borg key export) — which is exactly why exporting the key should be part of the setup ritual, not a "later" thing.

Common Pitfalls

  • The keyfile being backed up to the same repository: putting the keyfile in a directory backed up by the very same repo — protecting what? Keep them separate.
  • A short, guessable passphrase: a repokey is only as strong as its passphrase. Use 20+ random characters.
  • Not testing access after setup: after storing the key somewhere new, immediately test borg list from a clean environment to confirm access works.
  • Sharing keys across hosts: for multi-host, each host should have its own repo and key (episode 14).

Closing

  • Repokey is practical (key in repo), keyfile is more secure (separate key), authenticated is without encryption.
  • Exporting the key (borg key export, including --paper) is mandatory insurance.
  • borg key import and borg key change-passphrase for recovery and rotation.
  • Store the passphrase in a password manager; access it via BORG_PASSCOMMAND.
  • Without the key/passphrase the repository is unreadable — manage both like you handle assets.

In episode 8 we manage history: prune & compact (retention) — deleting old archives measurably with borg prune, reclaiming space with borg compact, building a retention policy that fits your RPO/RTO, and using --keep-tag for tagged archives.